Visualization tips for geoscientists – series outline

Visualization tips for geoscientists: Surfer

Visualization tips for geoscientists: Matlab

Visualization tips for geoscientists: Matlab, part II

Visualization tips for geoscientists: Matlab, part III

The rainbow is dead…long live the rainbow! – Perceptual palettes, part 1


This is the first  post in a series on the rainbow and similar color palettes. My goal is to demonstrate it is not a good idea to use these palettes to display scientific data, and then answer these two questions: (1) is there anything we can do to “fix” the rainbow, and (2) if not, can we design a new one from scratch.

The rainbow is dead…some examples

In a previous post I showed a pseudo-3D rendering of my left hand x-ray using intensity (which is a measure of bone thickness) as the elevation. I mapped the rendering to both grayscale and rainbow color palettes, and here I reproduced the two images side by side:

I used this example to argue (briefly) that the rainbow obscures some details and confuses images by introducing artifacts. Notice that in this case it clearly reduces the effectiveness of the pseudo-3D rendering in general. It also introduces inversions in the perception of elevation. The thick part in the head of the radius bone, indicated by the arrow, looks like a depression, whereas it is clearly (and correctly) a high in the grayscale version.

Continue reading